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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919517.1_cds_XP_016468710.1_61317
CDS Infomation

[gene=LOC107791207] [db_xref=GeneID:107791207] [protein=laccase-17-like] [protein_id=XP_016468710.1] [location=complement(join(11781..11911,11993..12958,13377..13505,13607..13851,14098..14249,14368..14487))] [gbkey=CDS]
Sequence

ATGGGCTACTGTTATCATTCTTGTTCCACTTCTATGGCAGCATCTTTGCTCTTTGGAATT
TCCATTTTTTGGCTATTGCCTCAGTCTGCATTTTGCACGACAAGGCACTATACATTCAAT
ATTGTGCAGCATAATGTAACACGATTATGCACCACGAAGAGCATAGTTAGCGTGAATGGA
CGTTTTCCTGGCCCTCGTCTCGTTGCAAGAGAAGGTGATCGAGTGATCGTTAAGGTGGTT
AACCATGTATCCAACAATATCTCTATTCACTGGCATGGAATTAGGCAACTTACAAGCGGA
TGGGCAGATGGACCAGCATATGTAACACAATGTCCGATACAAACTAACCAGAGTTACACG
TATAACTTCACGATCATCGGTCAGAGAGGAACTCTGTTCTGGCATGCTCATATTTCATGG
CTCAGAGCAACAGTTTATGGACCTATTATCATTCTGCCACAGCACAACGAGTCCTATCCA
TTTAAGAAACCTTATAAGGAAATTCCAATCTTATTTGGGGAATGGTGGAATGTAGATCCT
GAGGCTGTAATTAACCAGGCTCTTCAGACAGGAGGTGGTCCAAATGTTTCAGATGCATAT
ACCATCAATGGTTTCCCAGGGCCCTTGTATAATTGCTCCTCTAAAGATACATTCAAGCTG
AAGGTGAAGCCGGGAAAGACATACATGCTACGTTTGATCAACGCTGCACTGAATGATGAA
ATGTTCTTCAGCATTGCCAATCATACCCTCACCATTGTTGAAGCAGACGCTGTTTACTCC
AAACCATTTAACACAAATGTAGTCTTTATTACCCCTGGCCAAACCACCAATGTTCTTCTT
AGAACAAAGCCATATTACCCAAACGCCACCTTCCTAATGGCGGCTCAGCCATATTTCACT
GGCCAAGGAACTTTTGACAACTCCACTGCTGCCGGAATTCTAGAATATAAACCCCCCTTA
AATGGTTCTCCCACCAACAAAAATAAAATCAAGCTCTTTAAACCAACTCTACCAAATATA
ACTGCAACAGGTTTTGTTGCCAATTTCACCAAGAAATTCCGCAGCTTAGCCAGCGCTCGG
TTCCCAGCAAACGTTCCACAAACTGTTGACAAGCGTTTTCTGTTTACAGTAGGACTTGGT
TCGAGCCCATGCCCCAAAAACACGACATGTCAAGGACCTAATGGCACAAAATTTGCAGCA
TCAGTAAATAATGTATCTTTTGCTCTTCCAACAACAGCACTTCTGCAATCTCACTTCTTT
GGACAATCAAACGGAGTTTACACCACAGATTTTCCAACCAACCCTCTAAATCCATTCAAC
TATACAGGAACGTCACCAAACAACACTTTAGTAACCAACGCAACAAAGACTGTTGTCTTG
CCATTTAATTCGAGCGTTGAGGTTGTGCTACAGGACACTAACATTCTTGGCGCTGAAAAT
CACCCCCTTCACCTCCACGGTTACAATTTCTTTGTCGTTGGTGAAGGGTTTGGCAACTTT
GATCCTAACAAAGACCCTGCCAACTTTAATCTCAAGGACCCTATAGAGAGGAACACGGTT
GGTGTCCCCGCTGGTGGATGGATTGCTTTTAGATTCTTCGCAGATAATCCAGGAGTATGG
TTCATGCATTGCCATTTTGATGTGCACACAAGCTGGGGACTGAGAATGGCTTGGATCGTG
TTAGATGGGCCATTACCGAGTCAAAAGCTGCCTCCTCCACCTTCAGATCTTCCAAAATGT
TGA

Peptide Sequence

PEP ID

XP_016468710.1
PEP Infomation

PREDICTED: laccase-17-like [Nicotiana tabacum]
Sequence

MGYCYHSCSTSMAASLLFGISIFWLLPQSAFCTTRHYTFNIVQHNVTRLCTTKSIVSVNG
RFPGPRLVAREGDRVIVKVVNHVSNNISIHWHGIRQLTSGWADGPAYVTQCPIQTNQSYT
YNFTIIGQRGTLFWHAHISWLRATVYGPIIILPQHNESYPFKKPYKEIPILFGEWWNVDP
EAVINQALQTGGGPNVSDAYTINGFPGPLYNCSSKDTFKLKVKPGKTYMLRLINAALNDE
MFFSIANHTLTIVEADAVYSKPFNTNVVFITPGQTTNVLLRTKPYYPNATFLMAAQPYFT
GQGTFDNSTAAGILEYKPPLNGSPTNKNKIKLFKPTLPNITATGFVANFTKKFRSLASAR
FPANVPQTVDKRFLFTVGLGSSPCPKNTTCQGPNGTKFAASVNNVSFALPTTALLQSHFF
GQSNGVYTTDFPTNPLNPFNYTGTSPNNTLVTNATKTVVLPFNSSVEVVLQDTNILGAEN
HPLHLHGYNFFVVGEGFGNFDPNKDPANFNLKDPIERNTVGVPAGGWIAFRFFADNPGVW
FMHCHFDVHTSWGLRMAWIVLDGPLPSQKLPPPPSDLPKC

Transcript Sequence

Gene sequence data has not been registered.